PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do012552.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family bHLH
Protein Properties Length: 308aa    MW: 33192.3 Da    PI: 11.6525
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do012552.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.56.5e-051081831054
                 HHHHHHHHHHHHHHHCTSCCC..................................TTS-STCHHHHHHHHHHHHHH CS
         HLH  10 rrRRdriNsafeeLrellPkas...............................kapskKlsKaeiLekAveYIksL 54 
                 rr R+r+   ++eLr llP ++                               +++ k +s  +iL  A+  +k L
  Do012552.1 108 RRHRRRVSALYAELRALLPGLPtarrpwvspsarallrscwpvcrvcltpfclGGRRKPVSREQILAAATARVKAL 183
                 899*****************666*****************************6666666*********99988877 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508888.5598183IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
LQLLFQANRH QQKADTSLSL SSSPSARSHA HCTPDRTGTK AMASCYREQP LSSRTETEGP  60
TRRESLLAAD PLMAAGAGGL PLDAVGAPPA TAESAVERRR RLDRDGNRRH RRRVSALYAE  120
LRALLPGLPT ARRPWVSPSA RALLRSCWPV CRVCLTPFCL GGRRKPVSRE QILAAATARV  180
KALEDAAAML EAYRGRPRPS RREVGVSSGT VTFTARLPAP APAGALRRVV EAVERRGVRV  240
LVATMARHGG REGGVGFLVV AITAAAAAPE HLEIKAEKFL LYSLEKSQNL AAFLSMNHLG  300
FSLHVPVA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLK3ZEV72e-30K3ZEV7_SETIT; Uncharacterized protein
STRINGSi025105m5e-30(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP91411931